Person

Kaustav Sengupta

Position: PhD Student
e-mail: k.sengupta@cent.uw.edu.pl
Room: 3.59
0000-0003-0603-0916

Institutions:
Faculty of Mathematics and Information Science, Warsaw University of Technology
Centre of New Technologies, University of Warsaw

Biographical note

My main interest lies in the area of Bio-informatics focusing on the analysis of various networks such as Protein Interaction Network, Gene Interaction Network etc. based on topological properties.

Publications in lab:

• Własnowolski M, Kadlof M, Sengupta K, Plewczyński D, (2023)
  3D-GNOME 3.0: a three-dimensional genome modelling engine for analysing changes of promoter-enhancer contacts in the human genome.
  (Nucleic Acids Res) [Pub Med ID: 31362752]
• Sengupta K, Denkiewicz M, Chiliński M, Szczepińska T, Mollah A, Korsak S, D'Souza R, Ruan Y, Plewczyński D, (2022)
  Multi-scale phase separation by explosive percolation with single-chromatin loop resolution.
  (Comput Struct Biotechnol J) [Pub Med ID: 30778195]
• Sengupta K, Saha S, Halder A, Chatterjee P, Nasipuri M, Basu S, Plewczyński D, (2022)
  PFP-GO: Integrating protein sequence, domain and protein-protein interaction information for protein function prediction using ranked GO terms.
  (Front Genet) [Pub Med ID: 29477548]
• Chiliński M, Sengupta K, Plewczyński D, (2021)
  From DNA human sequence to the chromatin higher order organisation and its biological meaning: Using biomolecular interaction networks to understand the influence of structural variation on spatial genome organisation and its functional effect
  (Semin. Cell Dev. Biol.) [Pub Med ID: 34429265]
• Halder A, Denkiewicz M, Sengupta K, Basu S, Plewczyński D, (2019)
  Aggregated network centrality shows non-random structure of genomic and proteomic networks.
  (Methods) [Pub Med ID: 31740366]